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  • Top cofit genes for GFF5968 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 no 0.63
    2 GFF1713 no description no 0.59
    3 GFF5981 COGs COG3558 no 0.58
    4 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.58
    5 GFF2665 FIG001454: Transglutaminase-like enzymes, putative cysteine proteases no 0.58
    6 GFF2713 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.57
    7 GFF325 Nucleoside ABC transporter, substrate-binding protein no 0.57
    8 GFF6335 no description no 0.56
    9 GFF4994 Acyl-CoA-binding protein no 0.56
    10 GFF1598 no description no 0.55
    11 GFF5600 no description no 0.54
    12 GFF476 InterPro IPR005134 COGs COG2862 no 0.53
    13 GFF4614 Transcriptional regulator, AraC family no 0.53
    14 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain no 0.52
    15 GFF3495 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.52
    16 GFF5239 hypothetical protein no 0.51
    17 GFF3226 no description no 0.51
    18 GFF803 MutT/Nudix family protein no 0.51
    19 GFF6927 Transcriptional regulator, ArsR family no 0.50
    20 GFF4138 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.50

    Or look for negative cofitness