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  • Top cofit genes for GFF5966 from Variovorax sp. SCN45

    Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
    KEGG: penicillin-binding protein 1C

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2002 Thioredoxin related protein PA2694 no 0.61
    2 GFF2895 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) no 0.57
    3 GFF3204 no description no 0.54
    4 GFF1195 iron-sulphur protein no 0.54
    5 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.52
    6 GFF808 Polyhydroxyalkanoic acid synthase no 0.51
    7 GFF2211 Flp pilus assembly protein RcpC/CpaB no 0.51
    8 GFF626 CzcABC family efflux RND transporter, transmembrane protein no 0.50
    9 GFF6159 carbon monoxide dehydrogenase G protein no 0.49
    10 GFF5742 Flagellar motor switch protein FliN no 0.48
    11 GFF2328 no description no 0.48
    12 GFF1750 BUG/TctC family periplasmic protein no 0.47
    13 GFF6741 UPF0053 inner membrane protein YoaE no 0.47
    14 GFF5857 Fe2+-dicitrate sensor, membrane component no 0.47
    15 GFF2978 Aromatic ring-cleaving dioxygenase no 0.46
    16 GFF683 Transcriptional regulator, LysR family no 0.46
    17 GFF5985 dicarboxylic acid transporter PcaT no 0.46
    18 GFF2757 hypothetical protein no 0.46
    19 GFF3017 T6SS AAA+ chaperone ClpV (TssH) no 0.45
    20 GFF2916 UDP-glucose 4-epimerase (EC 5.1.3.2) no 0.45

    Or look for negative cofitness