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  • Top cofit genes for GFF596 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6324 Kup system potassium uptake protein no 0.56
    2 GFF4853 Transcriptional regulator, LysR family no 0.50
    3 GFF6248 Site-specific recombinase no 0.50
    4 GFF212 Ribosome association toxin RatA no 0.49
    5 GFF1690 KEGG: DNA-binding protein H-NS no 0.48
    6 GFF3424 FIG00443816: hypothetical protein no 0.48
    7 GFF6456 Lipid A phosphoethanolamine transferase, putative no 0.48
    8 GFF4660 hypothetical protein no 0.47
    9 GFF7160 hypothetical protein no 0.47
    10 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.46
    11 GFF2687 Protein containing domains DUF404, DUF407, DUF403 no 0.46
    12 GFF4657 hypothetical protein no 0.46
    13 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.46
    14 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.45
    15 GFF4984 Tricarboxylate transport protein TctC no 0.45
    16 GFF6328 LPS-assembly lipoprotein LptE no 0.45
    17 GFF4583 TRAP-type C4-dicarboxylate transport system, large permease component no 0.44
    18 GFF7102 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (EC 1.2.1.60) no 0.44
    19 GFF3618 Transcriptional regulator, LysR family no 0.44
    20 GFF2799 Molybdopterin-guanine dinucleotide biosynthesis protein MobB no 0.44

    Or look for negative cofitness