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  • Top cofit genes for GFF5955 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6145 2-aminoethylphosphonate utilization transcriptional regulator, GntR family no 0.56
    2 GFF5805 Putative transmembrane protein no 0.55
    3 GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.54
    4 GFF4803 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) no 0.54
    5 GFF1346 hypothetical protein no 0.54
    6 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p 0.25 0.53
    7 GFF4719 hypothetical protein no 0.53
    8 GFF1936 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical (EC 3.6.1.41) 0.31 0.53
    9 GFF4469 Cell division protein FtsA no 0.53
    10 GFF3958 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) no 0.53
    11 GFF653 no description no 0.53
    12 GFF1841 Xanthine dehydrogenase, molybdenum binding subunit (EC 1.17.1.4) no 0.53
    13 GFF5071 AmpG permease no 0.52
    14 GFF7064 Glutamate--cysteine ligase (EC 6.3.2.2) 0.25 0.51
    15 GFF7324 hypothetical protein no 0.51
    16 GFF2219 FIG00454641: hypothetical protein no 0.51
    17 GFF440 CobN-like chelatase BtuS for metalloporphyrine salvage no 0.51
    18 GFF17 hypothetical protein no 0.51
    19 GFF4215 L-amino acid ABC transporter (Glu/Asp/His/...), permease protein 1 AapQ no 0.51
    20 GFF931 Methylmalonyl-CoA mutase (EC 5.4.99.2) / B12 binding domain of Methylmalonyl-CoA mutase (EC 5.4.99.2) no 0.51

    Or look for negative cofitness