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  • Top cofit genes for GFF595 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF764 hypothetical protein no 0.63
    2 GFF2619 Rhs-family protein no 0.61
    3 GFF984 Protein phosphatase 2C-like no 0.60
    4 GFF4010 no description no 0.59
    5 GFF3524 Possible NADH oxidoreductase no 0.57
    6 GFF189 Negative transcriptional regulator no 0.56
    7 GFF1553 no description no 0.55
    8 GFF1529 Transcriptional regulator, AcrR family no 0.55
    9 GFF727 FIG01964566: Predicted membrane protein, hemolysin III homolog no 0.55
    10 GFF169 Protein-glutamate methylesterase (EC 3.1.1.61) no 0.54
    11 GFF3743 Twitching motility protein PilT no 0.53
    12 GFF6866 hypothetical protein no 0.53
    13 GFF2398 Uncharacterized MFS-type transporter no 0.52
    14 GFF2662 Deacetylases, including yeast histone deacetylase and acetoin utilization protein no 0.52
    15 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.51
    16 GFF119 FIG00348677: hypothetical protein no 0.51
    17 GFF1092 Phosphate ABC transporter, substrate-binding protein PstS (TC 3.A.1.7.1) no 0.50
    18 GFF7073 no description no 0.50
    19 GFF1337 ABC transporter, substrate-binding protein RSc1750 no 0.50
    20 GFF6669 hypothetical protein no 0.50

    Or look for negative cofitness