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  • Top cofit genes for GFF594 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate)
    SEED: Extracellular ligand-binding receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF56 hypothetical protein no 0.46
    2 GFF6058 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.46
    3 GFF5308 Epoxide hydrolase (EC 3.3.2.9) no 0.46
    4 GFF6851 no description no 0.44
    5 GFF4388 Type IV secretory pathway, protease TraF no 0.43
    6 GFF6908 putative membrane protein no 0.43
    7 GFF557 Plectin 1 no 0.42
    8 GFF7051 hypothetical protein no 0.42
    9 GFF2119 Type IV fimbrial biogenesis protein PilW no 0.42
    10 GFF72 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.41
    11 GFF5779 L-idonate 5-dehydrogenase (EC 1.1.1.264) no 0.41
    12 GFF526 Tricarboxylate transport transcriptional regulator TctD no 0.40
    13 GFF693 BUG/TctC family periplasmic protein no 0.40
    14 GFF3555 Mg-chelatase subunit ChlD no 0.40
    15 GFF7057 Uncharacterized protein conserved in bacteria no 0.40
    16 GFF4897 Probable ALANIN-rich signal peptide protein no 0.40
    17 GFF3730 Integral membrane protein no 0.40
    18 GFF7072 hypothetical protein no 0.39
    19 GFF336 no description no 0.39
    20 GFF6219 hypothetical protein no 0.39

    Or look for negative cofitness