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  • Top cofit genes for GFF5938 from Variovorax sp. SCN45

    T6SS component TssF (ImpG/VasA)
    SEED: Protein ImpG/VasA
    KEGG: type VI secretion system protein ImpG

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5746 Flagellar protein FliJ no 0.59
    2 GFF1252 Alkanesulfonate ABC transporter permease protein SsuC no 0.58
    3 GFF921 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) no 0.56
    4 GFF6086 Putative short-chain dehydrogenase no 0.54
    5 GFF1362 no description no 0.54
    6 GFF3440 FIG00460300: hypothetical protein no 0.53
    7 GFF4964 Sulfate permease no 0.53
    8 GFF5935 VgrG protein no 0.53
    9 GFF2458 CzcABC family efflux RND transporter, membrane fusion protein no 0.53
    10 GFF877 putative membrane protein no 0.52
    11 GFF920 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.52
    12 GFF5749 Flagellar motor switch protein FliG no 0.51
    13 GFF2054 RNA binding methyltransferase FtsJ like no 0.51
    14 GFF5184 no description no 0.51
    15 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) no 0.51
    16 GFF5241 General secretion pathway protein J no 0.50
    17 GFF1225 Glycine/D-amino acid oxidases (deaminating) no 0.50
    18 GFF875 no description no 0.50
    19 GFF3181 FIG005069: Hypothetical protein no 0.50
    20 GFF5598 putative phospholipase D family protein no 0.50

    Or look for negative cofitness