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  • Top cofit genes for GFF5937 from Variovorax sp. SCN45

    T6SS component TssG (ImpH/VasB)
    SEED: Uncharacterized protein ImpH/VasB
    KEGG: type VI secretion system protein ImpH

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6404 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.62
    2 GFF3989 PUTATIVE 4-HYDROXYBENZOYL-COA THIOESTERASE PROTEIN( EC:3.1.2.23 ) no 0.58
    3 GFF3214 FIG138928: iron-regulated membrane protein no 0.57
    4 GFF4884 UPF0380 proteins YafZ and homologs no 0.55
    5 GFF5583 Transcriptional regulator PA0181, LysR family no 0.54
    6 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.53
    7 GFF7195 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) no 0.52
    8 GFF6986 hypothetical protein no 0.52
    9 GFF6263 Uncharacterized protein Atu0170, clustered with phosphonate utilization no 0.51
    10 GFF837 FIG01002808: hypothetical protein no 0.50
    11 GFF6332 Maltodextrin glucosidase (EC 3.2.1.20) no 0.50
    12 GFF3535 Aquaporin Z no 0.50
    13 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.49
    14 GFF2337 hypothetical protein no 0.49
    15 GFF1377 Phosphohydrolase (MutT/nudix family protein) no 0.48
    16 GFF4103 N-methylhydantoinase A (EC 3.5.2.14) no 0.47
    17 GFF4910 hypothetical protein no 0.46
    18 GFF4982 Thiol:disulfide interchange protein DsbC no 0.46
    19 GFF2614 no description no 0.46
    20 GFF5480 no description no 0.45

    Or look for negative cofitness