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Cofit
Protein
Homologs
Top cofit genes for GFF5935 from
Variovorax sp. SCN45
VgrG protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4119
no description
no
0.56
2
GFF5999
DNA polymerase IV (EC 2.7.7.7)
no
0.56
3
GFF1136
hypothetical protein
no
0.56
4
GFF6389
Amidohydrolase domain protein
no
0.56
5
GFF2698
Transcriptional regulator, LysR family
no
0.54
6
GFF5938
T6SS component TssF (ImpG/VasA)
no
0.53
7
GFF5340
Efflux ABC transporter, ATP-binding protein
no
0.52
8
GFF3981
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.52
9
GFF1263
Serine acetyltransferase (EC 2.3.1.30)
no
0.51
10
GFF1217
Transcriptional regulator RpiR in protein degradation cluster
no
0.51
11
GFF3504
BUG/TctC family periplasmic protein
no
0.51
12
GFF7150
Branched-chain amino acid ABC transporter, substrate-binding protein LivJ (TC 3.A.1.4.1)
no
0.50
13
GFF3361
Hydrolase
no
0.50
14
GFF6718
no description
no
0.50
15
GFF528
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog)
no
0.50
16
GFF4124
no description
no
0.49
17
GFF6737
Uncharacterized aldehyde oxidase, 2Fe-2S subunit
no
0.49
18
GFF3731
Glutathione S-transferase
no
0.49
19
GFF6610
putative lipoprotein
no
0.48
20
GFF4999
hypothetical protein
no
0.48
Or look for
negative cofitness