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  • Top cofit genes for GFF5922 from Variovorax sp. SCN45

    T6SS forkhead associated domain protein ImpI/VasC
    SEED: Uncharacterized protein ImpI/VasC
    KEGG: FHA domain-containing protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5645 ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates) no 0.58
    2 GFF3662 hypothetical protein no 0.56
    3 GFF774 no description no 0.55
    4 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.53
    5 GFF429 RND efflux system, inner membrane transporter no 0.52
    6 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) no 0.52
    7 GFF5118 gluconolactonase family protein no 0.52
    8 GFF2021 FIG00538369: hypothetical protein no 0.51
    9 GFF5502 Transcriptional regulator, LysR family no 0.51
    10 GFF1926 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.50
    11 GFF6937 Membrane protein no 0.50
    12 GFF3265 Homoserine O-acetyltransferase (EC 2.3.1.31) no 0.50
    13 GFF2957 UPF0192 protein YfaS no 0.49
    14 GFF2183 Outer membrane component of TAM transport system no 0.49
    15 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.49
    16 GFF5874 hypothetical protein no 0.48
    17 GFF6742 NAD(P)H-flavin oxidoreductase no 0.48
    18 GFF5356 Aldose 1-epimerase no 0.48
    19 GFF6613 no description no 0.48
    20 GFF3997 Short-chain dehydrogenase/reductase SDR no 0.48

    Or look for negative cofitness