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  • Top cofit genes for GFF5917 from Variovorax sp. SCN45

    T6SS component TssB (ImpB/VipA)
    SEED: Uncharacterized protein ImpB
    KEGG: type VI secretion system protein ImpB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6383 FIG00440100: hypothetical protein no 0.75
    2 GFF3335 no description no 0.68
    3 GFF156 Glycosyl transferase, group 2 family no 0.68
    4 GFF2617 no description no 0.68
    5 GFF4181 hypothetical protein no 0.67
    6 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.67
    7 GFF2101 no description no 0.67
    8 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.67
    9 GFF1741 UPF0324 inner membrane protein YeiH 0.31 0.66
    10 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) 0.53 0.66
    11 GFF6262 Transcriptional regulator PhnF no 0.63
    12 GFF6704 no description no 0.63
    13 GFF4694 no description no 0.61
    14 GFF5203 hypothetical protein no 0.61
    15 GFF5831 Ketosteroid isomerase-related protein no 0.60
    16 GFF6872 FIG00904907: hypothetical protein no 0.60
    17 GFF7365 no description no 0.60
    18 GFF6497 Protein of unknown function (DUF1501) no 0.59
    19 GFF1675 ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.59
    20 GFF7080 no description no 0.57

    Or look for negative cofitness