• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF5916 from Variovorax sp. SCN45

    T6SS component TssA (ImpA)
    SEED: Uncharacterized protein ImpA
    KEGG: type VI secretion system protein ImpA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5982 Transcriptional regulator, AcrR family no 0.60
    2 GFF215 RNA polymerase sigma-54 factor RpoN no 0.59
    3 GFF2991 BUG/TctC family periplasmic protein no 0.58
    4 GFF3146 no description no 0.58
    5 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.56
    6 GFF5579 probable bifunctional hydroxylase/oxidoreductase no 0.53
    7 GFF3342 FIG00347825: hypothetical protein no 0.53
    8 GFF1752 Cysteine dioxygenase (EC 1.13.11.20) no 0.53
    9 GFF3561 Glycosyltransferases involved in cell wall biogenesis no 0.52
    10 GFF1943 DNA polymerase III alpha subunit (EC 2.7.7.7) no 0.51
    11 GFF198 Isochorismate pyruvate-lyase (EC 4.2.99.21) no 0.50
    12 GFF7281 no description no 0.50
    13 GFF4678 FIG00348290: hypothetical protein no 0.50
    14 GFF2480 Urease accessory protein UreG no 0.49
    15 GFF3990 hypothetical protein no 0.49
    16 GFF4121 no description no 0.49
    17 GFF5264 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) no 0.48
    18 GFF5639 Death on curing protein, Doc toxin no 0.48
    19 GFF1831 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 3 no 0.48
    20 GFF7140 FIG00349159: hypothetical protein no 0.47

    Or look for negative cofitness