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  • Top cofit genes for GFF5892 from Variovorax sp. SCN45

    Lysine exporter protein LysE/YggA
    SEED: Lysine exporter protein (LYSE/YGGA)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.76
    2 GFF4492 Protein of unknown function DUF484 no 0.75
    3 GFF2522 Glutaredoxin-related protein no 0.74
    4 GFF2567 Molybdopterin-synthase adenylyltransferase (EC 2.7.7.80) no 0.74
    5 GFF3867 Translation elongation factor LepA no 0.74
    6 GFF2144 tRNA-dihydrouridine synthase DusB no 0.73
    7 GFF1003 HflC protein 0.50 0.73
    8 GFF945 Excinuclease ABC subunit B 0.34 0.73
    9 GFF816 L-carnitine dehydratase/bile acid-inducible protein F no 0.73
    10 GFF1137 FIG00348850: hypothetical protein no 0.73
    11 GFF4821 Transcriptional regulator, AcrR family no 0.73
    12 GFF5538 ATP-dependent DNA helicase RecG (EC 3.6.4.12) 0.49 0.72
    13 GFF2825 Alkyl hydroperoxide reductase protein F no 0.72
    14 GFF2008 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) 0.49 0.72
    15 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) 0.86 0.72
    16 GFF2499 ATP/GTP-binding protein no 0.72
    17 GFF2137 Ribose operon repressor no 0.72
    18 GFF2572 Protein-export protein SecB (maintains pre-export unfolded state) 0.63 0.72
    19 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) no 0.71
    20 GFF2013 Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) 0.42 0.71

    Or look for negative cofitness