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Cofit
Protein
Homologs
Top cofit genes for GFF589 from
Variovorax sp. SCN45
Pirin
SEED: Pirin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF1666
N-methylhydantoinase A (EC 3.5.2.14)
0.47
0.48
2
GFF5401
2-keto-3-deoxy-L-fuconate dehydrogenase
no
0.42
3
GFF1986
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.42
4
GFF504
SAM-dependent methyltransferases
no
0.41
5
GFF4770
Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA
0.34
0.40
6
GFF4726
hypothetical protein
no
0.40
7
GFF6498
FIG00348192: hypothetical protein
0.55
0.40
8
GFF6125
Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1)
0.47
0.40
9
GFF7301
Glycogen phosphorylase (EC 2.4.1.1)
0.21
0.39
10
GFF3945
Phosphate transport regulator (distant homolog of PhoU)
0.48
0.39
11
GFF5376
hypothetical protein
no
0.38
12
GFF6665
Autolysin sensor kinase (EC 2.7.3.-)
no
0.38
13
GFF5428
YaeQ protein
0.60
0.37
14
GFF552
Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8)
0.39
0.37
15
GFF6809
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
0.28
0.36
16
GFF4874
Plasmid replication initiator protein
no
0.35
17
GFF182
FIG00347566: hypothetical protein
no
0.35
18
GFF4541
Uncharacterized protein conserved in bacteria
no
0.35
19
GFF4998
L-carnitine dehydratase/bile acid-inducible protein F
0.10
0.35
20
GFF325
Nucleoside ABC transporter, substrate-binding protein
no
0.35
Or look for
negative cofitness