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  • Top cofit genes for GFF5889 from Variovorax sp. SCN45

    Uracil-DNA glycosylase, family 1 (EC 3.2.2.27)
    SEED: Uracil-DNA glycosylase, family 1
    KEGG: uracil-DNA glycosylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2522 Glutaredoxin-related protein no 0.72
    2 GFF4383 hypothetical protein no 0.72
    3 GFF945 Excinuclease ABC subunit B 0.51 0.69
    4 GFF4944 Excinuclease ABC subunit A 0.78 0.69
    5 GFF446 Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) 0.26 0.69
    6 GFF4454 Exoribonuclease II (EC 3.1.13.1) no 0.68
    7 GFF4006 DNA polymerase I (EC 2.7.7.7) 0.66 0.68
    8 GFF4557 Dihydroorotase (EC 3.5.2.3) no 0.68
    9 GFF5390 RecA protein 0.27 0.68
    10 GFF1371 Fe-S protein, homolog of lactate dehydrogenase SO1521 no 0.67
    11 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.28 0.67
    12 GFF5876 Nitrogen regulation protein NtrY (EC 2.7.3.-) 0.18 0.66
    13 GFF997 UPF0070 protein YfgM no 0.66
    14 GFF6326 Gamma-glutamyl phosphate reductase (EC 1.2.1.41) 0.75 0.66
    15 GFF1973 NAD(P)H oxidoreductase YrkL @ Putative NADPH-quinone reductase (modulator of drug activity B) @ Flavodoxin 2 no 0.66
    16 GFF357 SOS-response repressor and protease LexA (EC 3.4.21.88) 0.23 0.66
    17 GFF2815 Primosomal replication protein N no 0.65
    18 GFF487 ATP-dependent protease La (EC 3.4.21.53) Type I 0.26 0.65
    19 GFF3118 Membrane alanine aminopeptidase N (EC 3.4.11.2) no 0.65
    20 GFF4398 Transcriptional regulator, AcrR family no 0.65

    Or look for negative cofitness