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  • Top cofit genes for GFF588 from Sphingobium sp. HT1-2

    Beta-carotene hydroxylase
    SEED: Beta-carotene hydroxylase
    KEGG: beta-carotene hydroxylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1862 Transcriptional regulator, MarR family no 0.81
    2 GFF3232 hypothetical protein no 0.79
    3 GFF3046 hypothetical protein no 0.78
    4 GFF2477 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) 0.44 0.76
    5 GFF91 Lytic murein transglycosylase no 0.72
    6 GFF1892 Nucleoside-diphosphate-sugar epimerase no 0.71
    7 GFF169 PnuC-like transporter linked to homoserine kinase and OMR no 0.71
    8 GFF3462 Transcriptional regulator, LysR family no 0.71
    9 GFF799 hypothetical protein no 0.69
    10 GFF987 Phage shock protein A @ Suppressor of sigma54-dependent transcription, PspA-like no 0.69
    11 GFF3668 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) no 0.69
    12 GFF185 Alkyl hydroperoxide reductase protein F no 0.68
    13 GFF3353 hypothetical protein no 0.68
    14 GFF3097 Inner membrane component of TAM transport system no 0.67
    15 GFF3395 Quinate/shikimate dehydrogenase [Pyrroloquinoline-quinone] (EC 1.1.5.8) no 0.67
    16 GFF3325 YdcF-like protein no 0.67
    17 GFF143 PhbF no 0.66
    18 GFF3483 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.66
    19 GFF2283 Quinone oxidoreductase (EC 1.6.5.5) no 0.66
    20 GFF4166 Ribosome hibernation promoting factor Hpf 0.44 0.66

    Or look for negative cofitness