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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF5879 from
Variovorax sp. SCN45
LemA
SEED: LemA
KEGG: LemA protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6031
Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1)
no
0.75
2
GFF4774
Broad-specificity amino acid ABC transporter, ATP-binding protein 2
no
0.71
3
GFF2740
4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
no
0.71
4
GFF6107
Zinc transporter, ZIP family
no
0.71
5
GFF1003
HflC protein
no
0.71
6
GFF4908
NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2)
no
0.70
7
GFF3957
Ribosome small subunit biogenesis RbfA-release protein RsgA
no
0.70
8
GFF3755
Transcriptional regulator, GntR family
no
0.70
9
GFF6326
Gamma-glutamyl phosphate reductase (EC 1.2.1.41)
no
0.69
10
GFF5677
Cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
no
0.69
11
GFF272
thioesterase superfamily protein
no
0.69
12
GFF6028
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like
no
0.69
13
GFF126
Repressor homolog
no
0.69
14
GFF1899
Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
no
0.69
15
GFF5318
Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
no
0.69
16
GFF2818
Phosphoenolpyruvate synthase (EC 2.7.9.2)
no
0.68
17
GFF4006
DNA polymerase I (EC 2.7.7.7)
0.39
0.68
18
GFF6127
Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
no
0.68
19
GFF5678
Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
no
0.68
20
GFF1900
Transcriptional regulator, LysR family
no
0.68
Or look for
negative cofitness