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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF5872 from
Variovorax sp. SCN45
Inner membrane protein YbhQ
SEED: Inner membrane protein YbhQ
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4857
benzoate MFS transporter BenK
no
0.61
2
GFF4310
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.60
3
GFF1292
Macrolide-specific efflux protein MacA
no
0.57
4
GFF4874
Plasmid replication initiator protein
no
0.56
5
GFF1031
Acetoacetate decarboxylase (EC 4.1.1.4)
no
0.55
6
GFF7146
Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
no
0.52
7
GFF6156
Aerobic carbon monoxide dehydrogenase (quinone), medium chain (EC 1.2.5.3)
no
0.51
8
GFF6984
RNA polymerase sigma factor for flagellar operon
no
0.50
9
GFF284
putative 2-pyrone-4,6-dicarboxylic acid hydrolase
no
0.50
10
GFF545
hypothetical protein
no
0.50
11
GFF419
hypothetical protein
no
0.50
12
GFF2985
BUG/TctC family periplasmic protein
no
0.50
13
GFF4886
hypothetical protein
no
0.49
14
GFF1433
hypothetical protein
no
0.49
15
GFF5683
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
no
0.49
16
GFF6593
Alcohol dehydrogenase (EC 1.1.1.1)
no
0.48
17
GFF4240
Integral membrane protein
no
0.48
18
GFF1607
D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2)
no
0.48
19
GFF1207
no description
no
0.48
20
GFF5190
L-arabinose 1-dehydrogenase (EC 1.1.1.376)
no
0.48
Or look for
negative cofitness