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  • Top cofit genes for GFF5865 from Variovorax sp. SCN45

    Probable iron export permease protein FetB
    SEED: YbbM seven transmembrane helix protein
    KEGG: putative ABC transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) no 0.64
    2 GFF4902 hypothetical protein no 0.57
    3 GFF87 no description no 0.56
    4 GFF5488 Protein of unknown function Smg no 0.56
    5 GFF4446 FIG018171: hypothetical protein of Cupin superfamily no 0.54
    6 GFF3912 Ferrous iron transport permease EfeU 0.53 0.54
    7 GFF6563 no description no 0.54
    8 GFF4801 DedA protein 0.44 0.53
    9 GFF815 COGs COG3777 no 0.53
    10 GFF4511 Transcriptional regulator, LysR family no 0.52
    11 GFF6165 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.51
    12 GFF4572 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.51
    13 GFF1044 hypothetical protein no 0.50
    14 GFF4074 Multicopper oxidase no 0.49
    15 GFF6439 Transcriptional regulator, LysR family no 0.48
    16 GFF432 Probable transcription regulator protein of MDR efflux pump cluster no 0.48
    17 GFF4261 RNA polymerase ECF-type sigma factor no 0.48
    18 GFF3747 putative esterase no 0.47
    19 GFF264 Efflux transport system, outer membrane factor (OMF) lipoprotein no 0.47
    20 GFF7117 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) no 0.47

    Or look for negative cofitness