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  • Top cofit genes for GFF5857 from Variovorax sp. SCN45

    Fe2+-dicitrate sensor, membrane component
    SEED: Fe2+-dicitrate sensor, membrane component

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7264 Gluconolactonase (EC 3.1.1.17) no 0.59
    2 GFF2698 Transcriptional regulator, LysR family no 0.56
    3 GFF1998 Two-component system sensor histidine kinase no 0.55
    4 GFF3308 Inner membrane protein CreD no 0.55
    5 GFF5999 DNA polymerase IV (EC 2.7.7.7) no 0.55
    6 GFF3810 Conserved membrane protein in copper uptake, YcnI / Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.55
    7 GFF1083 no description no 0.52
    8 GFF615 beta-glucosidase (EC 3.2.1.21) 0.42 0.51
    9 GFF1548 Tripartite tricarboxylate transporter TctA family no 0.50
    10 GFF2998 Virulence factor BrkB no 0.49
    11 GFF6003 no description no 0.49
    12 GFF4007 Glutamate carboxypeptidase (EC 3.4.17.11) no 0.48
    13 GFF717 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.48
    14 GFF5064 Exonuclease SbcC no 0.48
    15 GFF1232 Uncharacterized protein conserved in bacteria no 0.48
    16 GFF916 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) no 0.47
    17 GFF6433 hypothetical protein no 0.47
    18 GFF4530 MBL-fold metallo-hydrolase superfamily no 0.47
    19 GFF5966 Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-) no 0.47
    20 GFF5996 BUG/TctC family periplasmic protein no 0.47

    Or look for negative cofitness