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  • Top cofit genes for GFF5856 from Variovorax sp. SCN45

    Outer membrane receptor proteins, likely involved in siderophore uptake
    SEED: TonB-dependent siderophore receptor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2817 Probable proline-rich protein no 0.73
    2 GFF312 FIG021862: membrane protein, exporter no 0.69
    3 GFF3851 Uncharacterized MFS-type transporter no 0.69
    4 GFF4397 hypothetical protein no 0.66
    5 GFF2504 Cell division protein ZapD no 0.65
    6 GFF375 hypothetical protein no 0.65
    7 GFF7051 hypothetical protein no 0.65
    8 GFF5860 no description no 0.65
    9 GFF5855 T1SS secreted agglutinin RTX no 0.64
    10 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) 0.22 0.62
    11 GFF5840 hypothetical protein no 0.62
    12 GFF4396 Mobile element protein no 0.62
    13 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like no 0.62
    14 GFF6294 Cell division protein no 0.62
    15 GFF3910 MORN repeat family protein no 0.61
    16 GFF971 NLP/P60 protein no 0.61
    17 GFF3285 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.61
    18 GFF1316 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) no 0.61
    19 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) no 0.61
    20 GFF7373 CaiB/BaiF family protein no 0.61

    Or look for negative cofitness