• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF5852 from Variovorax sp. SCN45

    Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC
    SEED: Type I secretion system, membrane fusion protein LapC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) 0.48 0.47
    2 GFF1181 hypothetical protein no 0.42
    3 GFF7364 no description no 0.40
    4 GFF6865 Transcriptional regulator, Crp/Fnr family no 0.40
    5 GFF6724 hypothetical protein no 0.40
    6 GFF6872 FIG00904907: hypothetical protein no 0.40
    7 GFF21 no description no 0.39
    8 GFF3035 Ferrichrome-iron receptor no 0.39
    9 GFF7087 oxidoreductase FAD/NAD(P)-binding domain protein no 0.38
    10 GFF7030 no description no 0.38
    11 GFF1212 Oligopeptide transport permease protein OppC-like @ Glutathione ABC transporter, permease protein GsiD 0.42 0.36
    12 GFF1690 KEGG: DNA-binding protein H-NS no 0.36
    13 GFF5037 ABC transporter spermidine/putrescine-binding protein no 0.36
    14 GFF463 Malonyl-CoA decarboxylase (EC 4.1.1.9) no 0.36
    15 GFF6891 Phenazine biosynthesis protein PhzF like no 0.36
    16 GFF3611 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.36
    17 GFF2741 FIG002207: Probable transmembrane protein no 0.35
    18 GFF4890 hypothetical protein no 0.35
    19 GFF143 Dethiobiotin synthase BioD (EC 6.3.3.3) no 0.34
    20 GFF7020 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) 0.33 0.34

    Or look for negative cofitness