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  • Top cofit genes for GFF5831 from Variovorax sp. SCN45

    Ketosteroid isomerase-related protein
    SEED: Ketosteroid isomerase-related protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5621 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.67
    2 GFF4178 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) no 0.64
    3 GFF4328 hypothetical protein no 0.64
    4 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.64
    5 GFF1741 UPF0324 inner membrane protein YeiH no 0.64
    6 GFF1019 monooxygenase, FAD-binding no 0.62
    7 GFF2168 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.61
    8 GFF5203 hypothetical protein no 0.61
    9 GFF5917 T6SS component TssB (ImpB/VipA) no 0.60
    10 GFF2562 UPF0391 membrane protein RGE_28580 no 0.59
    11 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.59
    12 GFF2763 33 kDa chaperonin HslO no 0.58
    13 GFF2537 Glycerol-3-phosphate ABC transporter, substrate-binding protein UgpB no 0.57
    14 GFF1865 Transcriptional regulator, AraC family no 0.57
    15 GFF4791 RNA polymerase ECF-type sigma factor no 0.57
    16 GFF5636 Molybdenum ABC transporter, substrate-binding protein ModA no 0.56
    17 GFF4694 no description no 0.56
    18 GFF6584 Pyruvate kinase (EC 2.7.1.40) no 0.56
    19 GFF6383 FIG00440100: hypothetical protein no 0.56
    20 GFF3729 Transcriptional regulator, AraC family no 0.56

    Or look for negative cofitness