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  • Top cofit genes for GFF5830 from Variovorax sp. SCN45

    Aldehyde dehydrogenase (EC 1.2.1.3)
    SEED: Aldehyde dehydrogenase (EC 1.2.1.3)
    KEGG: phenylacetaldehyde dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4955 hypothetical protein no 0.59
    2 GFF6395 hypothetical protein no 0.58
    3 GFF1093 Phosphate ABC transporter, permease protein PstC (TC 3.A.1.7.1) no 0.57
    4 GFF994 Cytoskeleton protein RodZ no 0.52
    5 GFF4909 Two-component transcriptional response regulator, OmpR family no 0.51
    6 GFF4937 no description no 0.51
    7 GFF6294 Cell division protein no 0.50
    8 GFF5836 no description no 0.49
    9 GFF3759 Uridine kinase family protein YggC homolog no 0.49
    10 GFF6364 VgrG protein no 0.49
    11 GFF6819 hypothetical protein no 0.47
    12 GFF5647 ABC transporter, ATP-binding protein (cluster 12, methionine/phosphonates) no 0.47
    13 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.47
    14 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.47
    15 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.47
    16 GFF7325 Glucans biosynthesis glucosyltransferase H no 0.46
    17 GFF1157 DNA-directed RNA polymerase specialized sigma subunit, sigma24-like 0.40 0.46
    18 GFF5930 VgrG protein 0.27 0.46
    19 GFF4242 TRAP-type C4-dicarboxylate transport system, periplasmic component no 0.46
    20 GFF6573 Conjugative transfer protein TrbF no 0.45

    Or look for negative cofitness