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  • Top cofit genes for GFF5827 from Variovorax sp. SCN45

    FIG00452956: hypothetical protein
    SEED: FIG00452956: hypothetical protein
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5412 no description no 0.54
    2 GFF5144 no description no 0.52
    3 GFF734 no description no 0.51
    4 GFF4432 Two-component system response regulator protein no 0.51
    5 GFF7370 PAS domain with LuxR-type DNA-binding domain no 0.50
    6 GFF2184 VWA containing CoxE family protein no 0.50
    7 GFF6890 Threonine efflux protein no 0.49
    8 GFF5822 hypothetical protein no 0.49
    9 GFF4009 D-amino acid dehydrogenase (EC 1.4.99.6) no 0.49
    10 GFF3826 Response regulator receiver:LytTr DNA-binding region no 0.49
    11 GFF993 Type IV pilus biogenesis protein PilF no 0.48
    12 GFF5323 Type IV pilus biogenesis protein PilQ no 0.48
    13 GFF5416 Type IV fimbrial biogenesis protein PilW no 0.48
    14 GFF5320 Type IV pilus biogenesis protein PilN no 0.48
    15 GFF2151 twitching motility protein PilG no 0.47
    16 GFF5319 Type IV pilus biogenesis protein PilM no 0.47
    17 GFF5322 Type IV pilus biogenesis protein PilP no 0.47
    18 GFF5418 Type IV fimbrial biogenesis protein PilY1 no 0.47
    19 GFF5490 Uncharacterized protein with LysM domain, COG1652 no 0.47
    20 GFF5415 Type IV fimbrial biogenesis protein PilV no 0.47

    Or look for negative cofitness