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  • Top cofit genes for GFF5818 from Variovorax sp. SCN45

    Two-component transcriptional response regulator, NarL/FixJ family
    SEED: DNA-binding response regulator, LuxR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4135 Acyl-CoA dehydrogenase; probable dibenzothiophene desulfurization enzyme no 0.69
    2 GFF45 Phospholipase C (EC 3.1.4.3) no 0.64
    3 GFF4465 Transcriptional regulator, LysR family no 0.59
    4 GFF1687 BUG/TctC family periplasmic protein no 0.59
    5 GFF6334 no description no 0.57
    6 GFF4673 hypothetical protein no 0.57
    7 GFF6083 hypothetical protein PA3071 no 0.56
    8 GFF3370 hypothetical protein no 0.56
    9 GFF2123 Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II no 0.55
    10 GFF3148 no description no 0.55
    11 GFF6524 Zinc-regulated outer membrane receptor no 0.54
    12 GFF4537 Tetrapartite efflux system, inner membrane component FusBC-like no 0.54
    13 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) 0.32 0.53
    14 GFF1026 Probable chromate transporter protein no 0.53
    15 GFF3429 Transcriptional regulator, AraC family no 0.53
    16 GFF3589 Transcriptional regulator, LysR family no 0.53
    17 GFF1478 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) no 0.52
    18 GFF7211 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.52
    19 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.52
    20 GFF4546 Permease of the drug/metabolite transporter (DMT) superfamily 0.37 0.51

    Or look for negative cofitness