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  • Top cofit genes for GFF5815 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: transporter, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3032 Two-component transcriptional response regulator, LuxR family no 0.56
    2 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.53
    3 GFF423 Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) no 0.53
    4 GFF4623 Transcriptional regulator, AcrR family no 0.52
    5 GFF7180 no description no 0.52
    6 GFF2395 D-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.-) no 0.51
    7 GFF6259 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (EC 2.7.8.37) no 0.51
    8 GFF6469 TRAP-type transport system, large permease component, predicted N-acetylneuraminate transporter no 0.51
    9 GFF1364 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.50
    10 GFF1583 Fumarate hydratase class I, beta region (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32) no 0.50
    11 GFF4792 PhnB protein 0.40 0.49
    12 GFF1789 Hydroxymethylpyrimidine ABC transporter, transmembrane component no 0.48
    13 GFF3100 Aspartyl protease no 0.48
    14 GFF3477 Phosphoprotein phosphatase no 0.46
    15 GFF2953 Transcriptional regulator, AraC family no 0.46
    16 GFF6971 no description no 0.45
    17 GFF2931 no description no 0.45
    18 GFF7328 no description no 0.45
    19 GFF3136 no description no 0.45
    20 GFF3338 Threonine efflux protein no 0.45

    Or look for negative cofitness