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  • Top cofit genes for GFF5813 from Variovorax sp. SCN45

    Heavy metal sensor histidine kinase
    SEED: Signal transduction histidine kinase
    KEGG: two-component system, OmpR family, heavy metal sensor histidine kinase CusS

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5097 5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10) no 0.66
    2 GFF808 Polyhydroxyalkanoic acid synthase no 0.63
    3 GFF3547 no description no 0.62
    4 GFF5247 hypothetical protein no 0.61
    5 GFF7160 hypothetical protein no 0.61
    6 GFF624 hypothetical protein no 0.61
    7 GFF1692 Two-component system sensor histidine kinase no 0.60
    8 GFF37 Similar to Agmatine deiminase no 0.60
    9 GFF6549 no description no 0.60
    10 GFF5101 Dihydroxy-acid dehydratase (EC 4.2.1.9) no 0.59
    11 GFF2101 no description no 0.59
    12 GFF4018 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.58
    13 GFF1461 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.58
    14 GFF1074 no description no 0.57
    15 GFF2122 Type IV pilus biogenesis protein PilE no 0.56
    16 GFF6571 Conjugative transfer protein TrbI no 0.55
    17 GFF2617 no description no 0.55
    18 GFF109 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.55
    19 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) no 0.54
    20 GFF5917 T6SS component TssB (ImpB/VipA) 0.28 0.54

    Or look for negative cofitness