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  • Top cofit genes for GFF5805 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: putative transmembrane anti-sigma factor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF448 Adenosylcobinamide kinase (EC 2.7.1.156) / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) no 0.71
    2 GFF735 no description no 0.65
    3 GFF124 Beta-ureidopropionase (EC 3.5.1.6) no 0.65
    4 GFF2184 VWA containing CoxE family protein no 0.64
    5 GFF7016 FAD-dependent oxidoreductase no 0.64
    6 GFF1813 Acetylornithine deacetylase-like protein Acry_1162 no 0.63
    7 GFF1346 hypothetical protein no 0.63
    8 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX no 0.62
    9 GFF2987 CBS domain protein no 0.62
    10 GFF1594 Antitoxin DinJ (binds YafQ toxin) no 0.61
    11 GFF2219 FIG00454641: hypothetical protein no 0.61
    12 GFF3978 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.60
    13 GFF2650 hypothetical protein no 0.60
    14 GFF342 ATP-dependent Clp protease adaptor protein ClpS no 0.59
    15 GFF5440 RNA polymerase ECF-type sigma factor no 0.59
    16 GFF6695 Ubiquinol-cytochrome C reductase, cytochrome B subunit (EC 1.10.2.2) no 0.59
    17 GFF6770 2-dehydro-3-deoxyphosphogalactonate aldolase (EC 4.1.2.21) no 0.59
    18 GFF363 Transcriptional regulator, Crp/Fnr family no 0.58
    19 GFF4617 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.58
    20 GFF7324 hypothetical protein no 0.58

    Or look for negative cofitness