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  • Top cofit genes for GFF5803 from Variovorax sp. SCN45

    Urea ABC transporter, ATPase protein UrtE
    SEED: Urea ABC transporter, ATPase protein UrtE
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3717 Putative aminoacrylate peracid reductase RutC @ RidA/YER057c/UK114 superfamily protein no 0.51
    2 GFF5632 tRNA (adenine(37)-N6)-methyltransferase no 0.50
    3 GFF5807 hypothetical protein no 0.49
    4 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.48
    5 GFF3401 P-hydroxylaminobenzoate lyase no 0.48
    6 GFF4729 no description no 0.47
    7 GFF3736 UPF0102 protein YraN no 0.47
    8 GFF3814 OpgC protein no 0.47
    9 GFF1728 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) no 0.46
    10 GFF4206 gamma-BHC dehydrochlorinase no 0.46
    11 GFF811 Glutathione S-transferase (EC 2.5.1.18) 0.19 0.46
    12 GFF5458 D-erythronate dehydrogenase (NAD+) no 0.46
    13 GFF7242 hypothetical protein no 0.45
    14 GFF2248 Transcriptional regulatory protein RtcR 0.44 0.44
    15 GFF2962 RND efflux system, membrane fusion protein no 0.44
    16 GFF2207 Flp pilus assembly protein TadB no 0.44
    17 GFF6323 Benzoate transport protein 0.13 0.44
    18 GFF5944 Adenylosuccinate lyase (EC 4.3.2.2) no 0.44
    19 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.43
    20 GFF3352 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) no 0.43

    Or look for negative cofitness