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  • Top cofit genes for GFF5800 from Variovorax sp. SCN45

    Urea ABC transporter, permease protein UrtB
    SEED: Urea ABC transporter, permease protein UrtB
    KEGG: branched-chain amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF586 Pirin 0.29 0.49
    2 GFF7027 no description no 0.49
    3 GFF4818 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.47
    4 GFF4056 Copper/silver efflux RND transporter, transmembrane protein CusA 0.53 0.47
    5 GFF805 hypothetical protein no 0.46
    6 GFF5921 T6SS protein serine/threonine phosphatase PppA no 0.46
    7 GFF6622 Mobile element protein no 0.45
    8 GFF7062 probable carboxylesterase no 0.45
    9 GFF3144 hypothetical protein no 0.45
    10 GFF4298 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase no 0.45
    11 GFF2446 FIG00956403: hypothetical protein 0.35 0.45
    12 GFF2998 Virulence factor BrkB no 0.45
    13 GFF2473 hypothetical protein no 0.44
    14 GFF5243 General secretion pathway protein H no 0.43
    15 GFF7166 Glyoxalase family protein no 0.43
    16 GFF3593 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.43
    17 GFF2571 Glutaredoxin 3 (Grx3) 0.64 0.42
    18 GFF7237 hypothetical protein no 0.42
    19 GFF2195 FIG00732904: hypothetical protein no 0.41
    20 GFF704 Lactoylglutathione lyase and related lyases no 0.41

    Or look for negative cofitness