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  • Top cofit genes for PS417_02950 from Pseudomonas simiae WCS417

    tRNA-dihydrouridine synthase B
    SEED: tRNA dihydrouridine synthase B (EC 1.-.-.-)
    KEGG: tRNA-dihydrouridine synthase B

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26235 (Fe-S)-binding protein 0.55 0.39
    2 PS417_22780 XRE family transcriptional regulator 0.48 0.38
    3 PS417_18540 colicin V production CvpA no 0.37
    4 PS417_21390 hypothetical protein no 0.37
    5 PS417_22775 histidine kinase no 0.37
    6 PS417_21125 phosphoadenosine phosphosulfate reductase 0.33 0.37
    7 PS417_04295 peptidase PmbA 0.77 0.35
    8 PS417_27650 chemotaxis protein no 0.35
    9 PS417_03165 hypothetical protein 0.55 0.35
    10 PS417_26760 oxidase 0.82 0.35
    11 PS417_20650 hypothetical protein no 0.35
    12 PS417_16510 Clp protease ClpX 0.97 0.34
    13 PS417_19660 cobalamin biosynthesis protein CobQ 0.38 0.34
    14 PS417_27870 ATP-dependent DNA helicase RecG 0.72 0.34
    15 PS417_19685 protein phosphatase 0.73 0.33
    16 PS417_25645 peptidase M23 0.49 0.33
    17 PS417_19615 chemotaxis protein CheW no 0.33
    18 PS417_26225 electron transfer flavoprotein subunit beta 0.44 0.33
    19 PS417_15110 protein BatD 0.49 0.33
    20 PS417_23025 murein transglycosylase 0.63 0.32

    Or look for negative cofitness