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  • Top cofit genes for GFF58 from Variovorax sp. SCN45

    Tyrosine-protein kinase (EC 2.7.10.2)
    SEED: Tyrosine-protein kinase Wzc (EC 2.7.10.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5936 T6SS AAA+ chaperone ClpV (TssH) 0.32 0.54
    2 GFF2964 L-carnitine dehydratase/bile acid-inducible protein F no 0.53
    3 GFF3736 UPF0102 protein YraN no 0.51
    4 GFF815 COGs COG3777 no 0.51
    5 GFF7223 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.50
    6 GFF3593 Phosphoenolpyruvate synthase (EC 2.7.9.2) no 0.49
    7 GFF632 Urea ABC transporter, ATPase protein UrtE no 0.49
    8 GFF6964 Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) no 0.48
    9 GFF5054 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) 0.29 0.48
    10 GFF3070 no description no 0.48
    11 GFF4366 BUG/TctC family periplasmic protein no 0.48
    12 GFF1692 Two-component system sensor histidine kinase no 0.47
    13 GFF607 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.47
    14 GFF1081 hypothetical protein no 0.46
    15 GFF4089 Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4) 0.54 0.45
    16 GFF4744 Permease of the drug/metabolite transporter (DMT) superfamily no 0.45
    17 GFF874 no description no 0.44
    18 GFF3535 Aquaporin Z no 0.44
    19 GFF5531 hypothetical protein no 0.44
    20 GFF4701 Various polyols ABC transporter, permease protein 2 no 0.44

    Or look for negative cofitness