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  • Top cofit genes for GFF5794 from Variovorax sp. SCN45

    Polyphosphate kinase 2 (EC 2.7.4.1)
    SEED: UDP-galactose-lipid carrier transferase (EC 2.-.-.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4062 Copper resistance protein B no 0.52
    2 GFF839 Retron-type RNA-directed DNA polymerase (EC 2.7.7.49) no 0.48
    3 GFF4036 hypothetical protein no 0.48
    4 GFF5481 hypothetical protein no 0.47
    5 GFF3056 Nitrogen assimilation regulatory protein Nac no 0.47
    6 GFF4465 Transcriptional regulator, LysR family no 0.47
    7 GFF4100 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.44
    8 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) no 0.43
    9 GFF4199 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) no 0.43
    10 GFF7126 KEGG: transposase no 0.43
    11 GFF6840 Putative transmembrane protein no 0.43
    12 GFF6828 CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8) no 0.43
    13 GFF797 no description no 0.42
    14 GFF3421 Acetoacetyl-CoA synthetase (EC 6.2.1.16) no 0.42
    15 GFF2697 Oxidoreductase, short-chain dehydrogenase/reductase family 0.32 0.42
    16 GFF4218 no description no 0.42
    17 GFF2207 Flp pilus assembly protein TadB no 0.42
    18 GFF4871 FIG00457034: hypothetical protein no 0.42
    19 GFF3373 Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) no 0.42
    20 GFF3872 DNA recombination and repair protein RecO no 0.42

    Or look for negative cofitness