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  • Top cofit genes for GFF5789 from Variovorax sp. SCN45

    YciO protein, TsaC/YrdC paralog
    SEED: Hypothetical YciO protein, TsaC/YrdC paralog
    KEGG: putative translation factor

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4000 ATP-dependent DNA helicase UvrD/PcrA (EC 3.6.4.12) 0.47 0.62
    2 GFF5429 Iron(III) dicitrate transport protein FecA 0.39 0.61
    3 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) 0.70 0.60
    4 GFF5262 Ferric iron ABC transporter, iron-binding protein no 0.59
    5 GFF3555 Mg-chelatase subunit ChlD no 0.58
    6 GFF4211 Glutathione S-transferase, unnamed subgroup (EC 2.5.1.18) no 0.57
    7 GFF3258 hypothetical protein no 0.54
    8 GFF2527 GCN5-related N-acetyltransferase no 0.53
    9 GFF1119 Ribonuclease HI (EC 3.1.26.4) 0.40 0.52
    10 GFF2098 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.52
    11 GFF4937 no description no 0.51
    12 GFF899 Dienelactone hydrolase family protein no 0.50
    13 GFF6247 ApaG protein 0.45 0.50
    14 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) no 0.50
    15 GFF2568 Carboxyl-terminal protease (EC 3.4.21.102) 0.36 0.50
    16 GFF3186 FIG01046500: hypothetical protein no 0.49
    17 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.49
    18 GFF5521 Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.128) 0.35 0.49
    19 GFF4993 putative tetratricopeptide repeat family protein no 0.48
    20 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.48

    Or look for negative cofitness