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  • Top cofit genes for GFF5782 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4843 Conjugative transfer protein TrbF no 0.59
    2 GFF378 RNA (nucleoside 2'-O)-methyltransferase no 0.55
    3 GFF2669 3-oxoacyl-[acyl-carrier-protein] synthase, KASII (EC 2.3.1.179) no 0.55
    4 GFF4778 Broad-specificity amino acid ABC transporter, permease protein 1 no 0.53
    5 GFF4085 Transcriptional regulator, LysR family no 0.53
    6 GFF286 Transcriptional regulator, LysR family no 0.52
    7 GFF1356 Putative manganese efflux pump MntP no 0.51
    8 GFF4672 Exoenzymes regulatory protein AepA precursor no 0.51
    9 GFF1648 Ligand-binding SRPBCC domain protein family no 0.51
    10 GFF3145 Two-component system response regulator QseB no 0.50
    11 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.50
    12 GFF2047 Polyhydroxyalkanoic acid synthase no 0.50
    13 GFF3009 NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.49
    14 GFF7139 MATE efflux family protein no 0.48
    15 GFF3177 hypothetical protein no 0.48
    16 GFF4665 no description no 0.48
    17 GFF1885 Gluconate transporter family protein no 0.48
    18 GFF3451 no description no 0.48
    19 GFF6644 DNA-binding transcriptional regulator, MocR family / aminotransferase domain no 0.48
    20 GFF2237 Intracellular protease no 0.48

    Or look for negative cofitness