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  • Top cofit genes for GFF5739 from Variovorax sp. SCN45

    Flagellar biosynthesis protein FliQ
    SEED: Flagellar biosynthesis protein FliQ
    KEGG: flagellar biosynthetic protein FliQ

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1047 hypothetical protein no 0.63
    2 GFF1113 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.63
    3 GFF1372 Uncharacterized MFS-type transporter no 0.61
    4 GFF6998 Flagellar basal-body rod protein FlgB no 0.60
    5 GFF5672 Dna binding response regulator PrrA (RegA) 0.45 0.58
    6 GFF1797 FIG022199: FAD-binding protein no 0.58
    7 GFF2281 Short-chain dehydrogenase/reductase SDR 0.65 0.57
    8 GFF1837 Transcriptional regulator, LysR family no 0.57
    9 GFF1012 Cystathionine beta-lyase (EC 4.4.1.8) no 0.57
    10 GFF3755 Transcriptional regulator, GntR family no 0.57
    11 GFF2316 FIG015547: peptidase, M16 family no 0.56
    12 GFF38 no description no 0.54
    13 GFF3415 Cyclase no 0.54
    14 GFF1326 Peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) no 0.54
    15 GFF1520 Transcriptional regulator, IclR family no 0.53
    16 GFF6031 Branched-chain amino acid ABC transporter, ATP-binding protein LivG (TC 3.A.1.4.1) 0.36 0.53
    17 GFF1904 Uncharacterized MFS-type transporter no 0.53
    18 GFF3471 hypothetical protein no 0.52
    19 GFF5629 Uncharacterized MFS-type transporter no 0.52
    20 GFF4908 NAD(P) transhydrogenase N-domain of subunit alpha (EC 1.6.1.2) 0.66 0.52

    Or look for negative cofitness