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  • Top cofit genes for GFF5725 from Variovorax sp. SCN45

    Methyl-accepting chemotaxis sensor/transducer protein
    SEED: Methyl-accepting chemotaxis protein I (serine chemoreceptor protein)
    KEGG: methyl-accepting chemotaxis protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5402 Transcriptional regulator, IclR family no 0.51
    2 GFF1616 Phosphonate uptake and metabolism regulator, LysR-family no 0.50
    3 GFF6593 Alcohol dehydrogenase (EC 1.1.1.1) no 0.49
    4 GFF1433 hypothetical protein no 0.48
    5 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.47
    6 GFF4931 peptidase, family M14 no 0.47
    7 GFF7082 TnpA transposase 0.45 0.45
    8 GFF5313 Protein-methionine-sulfoxide reductase catalytic subunit MsrP 0.27 0.45
    9 GFF320 RNA polymerase ECF-type sigma factor no 0.44
    10 GFF4699 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.44
    11 GFF3908 FIG00582414: hypothetical protein no 0.44
    12 GFF2406 DipZ protein no 0.44
    13 GFF5428 YaeQ protein no 0.44
    14 GFF5750 Flagellar M-ring protein FliF no 0.43
    15 GFF1864 Transcriptional regulator, LysR family no 0.43
    16 GFF1362 no description no 0.43
    17 GFF6713 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.43
    18 GFF7287 Dipeptide ABC transporter, ATP-binding protein DppF (TC 3.A.1.5.2) no 0.43
    19 GFF2416 Transcriptional regulator YbhD, LysR family 0.30 0.43
    20 GFF6321 Ferrichrome-iron receptor no 0.43

    Or look for negative cofitness