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  • Top cofit genes for GFF5710 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7373 CaiB/BaiF family protein no 0.61
    2 GFF5165 Transcriptional regulator, LysR family no 0.61
    3 GFF4766 identified by similarity to GB:AAK22812.1; match to protein family HMM PF06676 no 0.58
    4 GFF4217 Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) no 0.55
    5 GFF3458 Rubisco activation protein CbbQ no 0.55
    6 GFF2002 Thioredoxin related protein PA2694 no 0.54
    7 GFF36 Similar to Agmatine deiminase no 0.54
    8 GFF35 FOG: Ankyrin repeat no 0.54
    9 GFF1607 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.53
    10 GFF7374 FIG00984748: hypothetical protein no 0.53
    11 GFF1965 Magnesium and cobalt efflux protein CorC no 0.52
    12 GFF2429 putative membrane protein no 0.52
    13 GFF1630 Esterase/lipase no 0.52
    14 GFF5098 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.51
    15 GFF567 KEGG: type IV fimbrial biogenesis protein FimT no 0.49
    16 GFF7313 hypothetical protein no 0.49
    17 GFF4664 hypothetical protein no 0.49
    18 GFF5902 probable membrane protein STY1534 no 0.49
    19 GFF5401 2-keto-3-deoxy-L-fuconate dehydrogenase no 0.49
    20 GFF2396 MlrC no 0.49

    Or look for negative cofitness