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  • Top cofit genes for GFF5707 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: HTH-type transcriptional regulator dgdR

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4774 Broad-specificity amino acid ABC transporter, ATP-binding protein 2 no 0.69
    2 GFF6273 Nicotinamide-nucleotide amidase (EC 3.5.1.42) 0.44 0.61
    3 GFF2658 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) 0.19 0.56
    4 GFF271 2-methylcitrate synthase (EC 2.3.3.5) no 0.56
    5 GFF3302 no description no 0.55
    6 GFF7318 RND efflux system, membrane fusion protein no 0.55
    7 GFF690 Transcriptional regulator, IclR family no 0.54
    8 GFF2192 FIG00932626: hypothetical protein no 0.53
    9 GFF4099 Ser/Thr protein phosphatase family protein no 0.53
    10 GFF272 thioesterase superfamily protein no 0.53
    11 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) no 0.53
    12 GFF6528 Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77) no 0.52
    13 GFF268 Carboxyvinyl-carboxyphosphonate phosphorylmutase (EC 2.7.8.23) no 0.52
    14 GFF2728 hypothetical protein no 0.52
    15 GFF365 Acyl-CoA dehydrogenase 0.44 0.51
    16 GFF2848 UPF0098 protein PH1269 no 0.51
    17 GFF1168 Arginyl-tRNA--protein transferase (EC 2.3.2.8) 0.41 0.51
    18 GFF5823 NAD(P) transhydrogenase subunit beta (EC 1.6.1.2) no 0.51
    19 GFF5331 Transposase and inactivated derivatives no 0.51
    20 GFF4967 Glutathione S-transferase family protein no 0.51

    Or look for negative cofitness