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  • Top cofit genes for GFF5700 from Hydrogenophaga sp. GW460-11-11-14-LB1

    extracellular solute-binding protein, family 3
    SEED: extracellular solute-binding protein, family 3
    KEGG: polar amino acid transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3035 Acyltransferase 3 no 0.58
    2 GFF2158 Transcriptional regulator, LysR family no 0.57
    3 GFF3339 RNA polymerase sigma factor RpoE no 0.56
    4 GFF985 Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) no 0.55
    5 GFF3015 Na(+)/H(+) antiporter no 0.55
    6 GFF1172 Chloramphenicol-sensitive protein rarD no 0.53
    7 GFF258 Sulfite dehydrogenase cytochrome subunit SoxD no 0.51
    8 GFF5282 hypothetical protein no 0.51
    9 GFF1877 probable MFS transporter no 0.50
    10 GFF2210 Hydrogenase transcriptional regulatory protein HoxA no 0.50
    11 GFF2623 transcriptional regulator, AraC family no 0.50
    12 GFF726 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.50
    13 GFF1121 Heavy metal sensor histidine kinase no 0.50
    14 GFF2332 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.50
    15 GFF3542 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) no 0.49
    16 GFF2931 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) no 0.49
    17 GFF4533 hypothetical protein no 0.49
    18 GFF5050 TPR repeat no 0.49
    19 GFF4953 hypothetical protein no 0.48
    20 GFF4152 FIG050068: DNA-binding protein no 0.48

    Or look for negative cofitness