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  • Top cofit genes for GFF5698 from Variovorax sp. SCN45

    2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) / 3'-nucleotidase (EC 3.1.3.6)
    SEED: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)
    KEGG: 2',3'-cyclic-nucleotide 2'-phosphodiesterase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2089 CDP-alcohol phosphatidyltransferase family protein no 0.53
    2 GFF4221 3-oxoadipate CoA-transferase subunit A (EC 2.8.3.6) no 0.53
    3 GFF4886 hypothetical protein no 0.50
    4 GFF5438 Glutathione peroxidase (EC 1.11.1.9) 0.40 0.50
    5 GFF564 hypothetical protein no 0.49
    6 GFF775 no description no 0.48
    7 GFF545 hypothetical protein no 0.47
    8 GFF3540 hypothetical protein no 0.47
    9 GFF6798 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.46
    10 GFF483 Fumarate hydratase class I, aerobic (EC 4.2.1.2) 0.38 0.45
    11 GFF494 RND efflux system, membrane fusion protein no 0.45
    12 GFF2642 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.44
    13 GFF156 Glycosyl transferase, group 2 family no 0.43
    14 GFF5917 T6SS component TssB (ImpB/VipA) no 0.43
    15 GFF6820 hypothetical protein no 0.42
    16 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.42
    17 GFF2984 Adenosine deaminase (EC 3.5.4.4) no 0.42
    18 GFF4382 FIG00957806: hypothetical protein no 0.42
    19 GFF4674 Amidohydrolase family protein no 0.41
    20 GFF481 Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) no 0.41

    Or look for negative cofitness