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Cofit
Protein
Homologs
Top cofit genes for GFF5688 from
Variovorax sp. SCN45
Transcriptional regulator, LysR family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF940
Permease of the drug/metabolite transporter (DMT) superfamily
no
0.52
2
GFF4096
no description
no
0.50
3
GFF5978
Nucleoside 2-deoxyribosyltransferase
no
0.49
4
GFF4586
no description
no
0.48
5
GFF1247
Sulfate and thiosulfate binding protein CysP
no
0.47
6
GFF3186
FIG01046500: hypothetical protein
no
0.47
7
GFF1267
Probable lipoprotein signal peptide
no
0.46
8
GFF3940
putative membrane protein
no
0.46
9
GFF763
Transporter, LysE family
0.66
0.46
10
GFF7109
BUG/TctC family periplasmic protein
no
0.45
11
GFF1646
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
no
0.44
12
GFF3505
hypothetical protein
no
0.44
13
GFF4188
Signal peptidase I (EC 3.4.21.89)
no
0.43
14
GFF541
Ser-tRNA(Ala) deacylase; Gly-tRNA(Ala) deacylase
no
0.43
15
GFF1872
no description
no
0.42
16
GFF2096
Acyl-CoA dehydrogenase family protein
no
0.42
17
GFF3214
FIG138928: iron-regulated membrane protein
no
0.42
18
GFF2024
L-lysine permease
no
0.42
19
GFF2900
Subtilisin-like serine proteases
no
0.41
20
GFF1783
Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO
no
0.41
Or look for
negative cofitness