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  • Top cofit genes for GFF5686 from Variovorax sp. SCN45

    FIG01027227: hypothetical protein
    SEED: FIG01027227: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF256 Twitching motility protein PilT no 0.55
    2 GFF6787 Copper tolerance protein no 0.53
    3 GFF1889 Aerobic C4-dicarboxylate transporter for fumarate, L-malate, D-malate, succunate no 0.51
    4 GFF5055 BUG/TctC family periplasmic protein no 0.50
    5 GFF7352 1,2-phenylacetyl-CoA epoxidase, subunit D (EC 1.14.13.149) no 0.50
    6 GFF5263 Ferric iron ABC transporter, permease protein no 0.49
    7 GFF5035 Opine oxidase subunit A no 0.49
    8 GFF456 Transcriptional regulator, AraC family no 0.49
    9 GFF493 RND efflux system, inner membrane transporter no 0.49
    10 GFF6077 G:T/U mismatch-specific uracil/thymine DNA-glycosylase (EC 3.2.2.27) no 0.47
    11 GFF1354 FMN-dependent NADH-azoreductase (EC 1.7.1.6) no 0.47
    12 GFF4853 Transcriptional regulator, LysR family no 0.47
    13 GFF4246 FIG00464377: hypothetical protein no 0.46
    14 GFF685 Tricarboxylate transport protein TctC no 0.46
    15 GFF2655 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit no 0.46
    16 GFF4875 hypothetical protein no 0.46
    17 GFF5501 Glyoxalase family protein no 0.45
    18 GFF5259 Na+/solute symporter no 0.45
    19 GFF7342 Oxidoreductase no 0.45
    20 GFF1967 FAD linked oxidase-like no 0.45

    Or look for negative cofitness