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  • Top cofit genes for GFF5684 from Variovorax sp. SCN45

    3-ketoacyl-CoA thiolase (EC 2.3.1.16)
    SEED: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
    KEGG: acetyl-CoA C-acetyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4783 Penicillin acylase (EC 3.5.1.11) no 0.63
    2 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) no 0.61
    3 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.61
    4 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.61
    5 GFF5840 hypothetical protein no 0.59
    6 GFF3135 no description no 0.59
    7 GFF359 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.58
    8 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.58
    9 GFF5410 Adenylate cyclase (EC 4.6.1.1) no 0.57
    10 GFF6230 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain no 0.57
    11 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.57
    12 GFF183 Virulence protein no 0.56
    13 GFF1315 Cyclic di-GMP-binding protein BcsB no 0.56
    14 GFF5668 Uncharacterized MFS-type transporter no 0.56
    15 GFF7322 hypothetical protein no 0.56
    16 GFF7085 BUG/TctC family periplasmic protein no 0.56
    17 GFF1384 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.55
    18 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.55
    19 GFF5270 BUG/TctC family periplasmic protein no 0.55
    20 GFF3582 Tripartite tricarboxylate transporter TctC family no 0.55

    Or look for negative cofitness