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  • Top cofit genes for GFF5679 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: MFS permease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6470 TRAP-type C4-dicarboxylate transport system, large permease component no 0.54
    2 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative no 0.51
    3 GFF2792 Chaperone protein ClpB (ATP-dependent unfoldase) no 0.49
    4 GFF3050 Lactam utilization protein LamB 0.32 0.47
    5 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.46
    6 GFF5433 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.46
    7 GFF5606 Xylose-responsive transcription regulator, ROK family no 0.45
    8 GFF200 Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB no 0.45
    9 GFF837 FIG01002808: hypothetical protein no 0.45
    10 GFF5671 FIG01964566: Predicted membrane protein, hemolysin III homolog 0.26 0.44
    11 GFF5403 no description no 0.44
    12 GFF6177 Putative transmembrane protein no 0.43
    13 GFF460 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.43
    14 GFF316 Transmembrane protein no 0.43
    15 GFF3768 no description no 0.42
    16 GFF4241 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.42
    17 GFF5778 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.42
    18 GFF823 Inner membrane protein YbaL, KefB/KefC family 0.56 0.42
    19 GFF5467 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.41
    20 GFF2276 Chlorogenate esterase no 0.41

    Or look for negative cofitness