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  • Top cofit genes for GFF5653 from Variovorax sp. SCN45

    Acyl-CoA dehydrogenase (EC 1.3.8.1), Mycobacterial subgroup FadE16
    SEED: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4904 hypothetical protein no 0.61
    2 GFF6335 no description no 0.55
    3 GFF6122 ABC-type antimicrobial peptide transport system, permease component no 0.51
    4 GFF5601 Predicted hydrolase of the alpha/beta-hydrolase fold no 0.50
    5 GFF5009 hypothetical protein no 0.50
    6 GFF4996 no description no 0.48
    7 GFF4461 hypothetical protein no 0.46
    8 GFF76 Alkanesulfonates transport system permease protein no 0.46
    9 GFF801 Murein hydrolase activator NlpD no 0.46
    10 GFF796 Transcriptional activator MetR no 0.46
    11 GFF2038 ABC transporter, substrate-binding protein (cluster 7, di-/tri-carboxylate) no 0.45
    12 GFF5461 2-dehydrotetronate isomerase (EC 5.3.1.35) no 0.45
    13 GFF6910 Xanthine permease no 0.45
    14 GFF6502 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.44
    15 GFF5946 T6SS Serine/threonine protein kinase (EC 2.7.11.1) PpkA no 0.44
    16 GFF5356 Aldose 1-epimerase no 0.43
    17 GFF567 KEGG: type IV fimbrial biogenesis protein FimT no 0.43
    18 GFF500 Lysine exporter protein (LYSE/YGGA) no 0.43
    19 GFF4571 Acyl-CoA dehydrogenase family protein no 0.43
    20 GFF4989 Transcriptional regulator, LysR family no 0.43

    Or look for negative cofitness