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  • Top cofit genes for GFF5647 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 12, methionine/phosphonates)
    SEED: Phosphonate ABC transporter ATP-binding protein (TC 3.A.1.9.1)
    KEGG: phosphonate transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6819 hypothetical protein no 0.57
    2 GFF6613 no description no 0.52
    3 GFF5986 hypothetical protein no 0.51
    4 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.51
    5 GFF5018 Uncharacterized protein YpeB 0.25 0.51
    6 GFF2829 Uncharacterized protein CC_3060 no 0.51
    7 GFF6856 DipZ protein no 0.51
    8 GFF2083 putative periplasmic membrane protein no 0.50
    9 GFF3074 Putative polysaccharide deacetylase no 0.50
    10 GFF30 Murein endolytic transglycosylase MltG no 0.49
    11 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.49
    12 GFF2613 no description no 0.49
    13 GFF5235 General secretion pathway protein D / Type II secretion outermembrane pore forming protein (PulD) no 0.48
    14 GFF6533 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) / DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.48
    15 GFF3662 hypothetical protein no 0.48
    16 GFF6608 hypothetical protein no 0.48
    17 GFF5830 Aldehyde dehydrogenase (EC 1.2.1.3) no 0.47
    18 GFF4767 Efflux ABC transporter, permease/ATP-binding protein 0.31 0.47
    19 GFF1083 no description no 0.47
    20 GFF6573 Conjugative transfer protein TrbF no 0.47

    Or look for negative cofitness