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  • Top cofit genes for GFF5645 from Variovorax sp. SCN45

    ABC transporter, permease protein (cluster 12, methionine/phosphonates) / ABC transporter, permease protein (cluster 12, methionine/phosphonates)
    SEED: Phosphonate ABC transporter permease protein phnE1 (TC 3.A.1.9.1)
    KEGG: phosphonate transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2021 FIG00538369: hypothetical protein no 0.58
    2 GFF6613 no description no 0.58
    3 GFF5922 T6SS forkhead associated domain protein ImpI/VasC no 0.58
    4 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.51
    5 GFF3308 Inner membrane protein CreD no 0.50
    6 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.50
    7 GFF4858 Transposase no 0.50
    8 GFF774 no description no 0.49
    9 GFF3667 Uncharacterized MFS-type transporter no 0.49
    10 GFF2698 Transcriptional regulator, LysR family no 0.47
    11 GFF1699 hypothetical protein no 0.47
    12 GFF6937 Membrane protein no 0.47
    13 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily no 0.47
    14 GFF3386 hypothetical protein no 0.46
    15 GFF6139 Serine/threonine kinase no 0.46
    16 GFF3662 hypothetical protein no 0.46
    17 GFF4994 Acyl-CoA-binding protein 0.33 0.46
    18 GFF6317 hypothetical protein no 0.46
    19 GFF3074 Putative polysaccharide deacetylase no 0.45
    20 GFF4184 Filamentous haemagglutinin family outer membrane protein associated with VreARI signalling system no 0.45

    Or look for negative cofitness