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Cofit
Protein
Homologs
Top cofit genes for GFF5629 from
Variovorax sp. SCN45
Uncharacterized MFS-type transporter
SEED: MFS permease
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF7193
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.62
2
GFF3221
hypothetical protein
no
0.57
3
GFF1679
Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9)
no
0.55
4
GFF3584
hypothetical protein
no
0.53
5
GFF3110
Nitrilotriacetate monooxygenase component A (EC 1.14.13.-)
no
0.52
6
GFF5739
Flagellar biosynthesis protein FliQ
no
0.52
7
GFF2030
ABC-type branched-chain amino acid transport systems, periplasmic component
no
0.52
8
GFF6998
Flagellar basal-body rod protein FlgB
no
0.52
9
GFF4821
Transcriptional regulator, AcrR family
no
0.51
10
GFF2108
hypothetical protein
0.24
0.50
11
GFF5281
Xylulose kinase (EC 2.7.1.17)
no
0.49
12
GFF2643
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.49
13
GFF816
L-carnitine dehydratase/bile acid-inducible protein F
no
0.49
14
GFF912
putative acetyl esterase
no
0.49
15
GFF7221
Protein lysine acetyltransferase Pat (EC 2.3.1.-)
no
0.49
16
GFF7368
Enoyl-CoA hydratase (EC 4.2.1.17)
no
0.49
17
GFF1187
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
no
0.49
18
GFF930
Transcriptional regulator, GntR family
no
0.48
19
GFF4277
Small subunit naph/bph dioxygenase
no
0.48
20
GFF1173
P-hydroxybenzoate hydroxylase (EC 1.14.13.2)
no
0.47
Or look for
negative cofitness