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  • Top cofit genes for GFF5629 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: MFS permease

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7193 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no 0.62
    2 GFF3221 hypothetical protein no 0.57
    3 GFF1679 Riboflavin synthase eubacterial/eukaryotic (EC 2.5.1.9) no 0.55
    4 GFF3584 hypothetical protein no 0.53
    5 GFF3110 Nitrilotriacetate monooxygenase component A (EC 1.14.13.-) no 0.52
    6 GFF5739 Flagellar biosynthesis protein FliQ no 0.52
    7 GFF2030 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.52
    8 GFF6998 Flagellar basal-body rod protein FlgB no 0.52
    9 GFF4821 Transcriptional regulator, AcrR family no 0.51
    10 GFF2108 hypothetical protein 0.24 0.50
    11 GFF5281 Xylulose kinase (EC 2.7.1.17) no 0.49
    12 GFF2643 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.49
    13 GFF816 L-carnitine dehydratase/bile acid-inducible protein F no 0.49
    14 GFF912 putative acetyl esterase no 0.49
    15 GFF7221 Protein lysine acetyltransferase Pat (EC 2.3.1.-) no 0.49
    16 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.49
    17 GFF1187 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) no 0.49
    18 GFF930 Transcriptional regulator, GntR family no 0.48
    19 GFF4277 Small subunit naph/bph dioxygenase no 0.48
    20 GFF1173 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) no 0.47

    Or look for negative cofitness